Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886829.1_cds_XP_016440999.1_36399
CDS Infomation

[gene=LOC107766683] [db_xref=GeneID:107766683] [protein=serine/threonine-protein kinase EDR1-like isoform X7] [protein_id=XP_016440999.1] [location=join(131010..131043,134070..134449,134563..135232,135570..135610,136070..136138,136926..137026,137146..137224,138989..139087,139205..139273,139388..139437,139523..139604,139775..139869,140786..140888)] [gbkey=CDS]
Sequence

ATGTCAGTGGCGTACGCGGGGATTAGTACAAGCGAAGCTCTTGGACGAAATCCTATTGAG
CTCCTAACAGATGCTCGGGATTATGGTGATGCTGATCACGTTGTTCACCAAGTGAAAAAG
GGTGAGATTTGGACTAGACAGTTTCCAGCTAAGAATAAGCAAGGGGATAGATTCGTAGTC
GTTGCTACCAATACCCCTTTTTATGACGATGATGGTACTTTCGTCGGTGTTATCTCTATA
TCAAGTGATGTGAGGCTTTTTCAAGAAACAGGGGTTGCATCGATGGGAGTGAAGCAGTTG
GAAGCTGATACGACATTCAGAGCAGTTGGAGCCAGGACCCTTGCTTCTTCCAAACTTGGA
CTTGATCGCCAACAGCCTCTGCAAGTTACCATTGCCTCTAAAATATCTAATTTGGCCTCA
AAGGTGAGCAACAAGGTTAAGTCAAAAATAAAGACAGGAGAGAGCAGCGTGCTTCGTGAA
AGTGGAAGTGGAGATAGTCATCATTCTGACCACACATTTTCTGATGCTGCTCTCCCAGAT
CACAGGGAGGATGCAAATTCAAGGGGAGGCAGCACACCTATGGGAGATGTTCACCCTTTT
CCAGTTGGGATATTCTCTAGTCTTGCAAAGGAGGAGCACTCCCCAGGGAAAGCCTCAAGT
GATTGTGGGGATGAGAGTGAGGGAAAACAAGGAATTTCAACTATTATCACCTCTAAGGCA
GAGGCGTGGATGGCAAAGAAAATCTTATCATGGCCATGGAAAGGCAACGAGCGAGAAGCG
TCAGAGGCAAAGACTACACGATTTATATGGCCTTGGCTAATCAATGACCAAGACAATGAG
TTGAGTCACAGTAACAGGTATAATGCACTAAAACCAAACAATCAGTTTATTGATACTAAC
CGGACAACCACCTATGAAGCTTCTGGATCCTGTTCATCTTCATTTTGTGTCAACAGCACA
AGCAGTGCTAGCAGCTGTAGAAGCACCAGCAGTAGCGCTTTTAGTAAGGTGGGCGTAGAT
ACTGGTCGCCTGGATTACGAAATCTTGTGGGAGGACTTAACAATCAGAGAACAGATTGGA
GAAGGTTCTTGTGGAAAAGTTTATCGTGCGCTGTGGTATGGATCAGATGTTGCTGTTAAA
GTATTTGCAAAGCAAGAATATTCTGAAGAAGTGATATATTCCTTCAAACAGGAGGTGTCC
CTTATGAAACTACTTCGACATCCAAATATTCTTCTATTCATGGGTGCAGTAACTTCACCT
GAACGCCTCTGCATTGTCACAGAGTTCCTGCGACGGGGAAGTTTGTTCAGGCTATTACAG
AGGAATTCATCCAAATTAGAATGGAGACGACGGATCCACATGGCTTTAGACATAGCCCGT
GGCATGAATTATCTACATCATCTTAACCCACCTATAGTTCATCGTGACTTGAAGTCTTCA
AATCTTCTTGTGGACAAGAACTGGACTGTTAAGGTTGGGGACTTTGGTCTATCACGTCTT
AAGCATGAAACATATCTAGCAACAAAGACGGGTAAAGGAACGCCTCAATGGATGGCTCCA
GAAGTTCTTCGCAGTGAACATTCAGATGAGAAGTCTGATATATACAGTTTTGGAGTGATA
CTGTGGGAACTTGCCACTGGAAAAATCCCTTGGGATAACCTCAACCCAGTGCAGGTGATT
GGAGCTGTAGGGTTCATGAATCAGCGGCTAGATATCCCAAAGGATGTTCATCCGCAGTGG
GCTTCTATTATCGAGAGCTGCTGGAATAGTGAACCACGGTCTCGCCCGTCTTCCAAAAAA
TTGGTGGAGAAACTTAATGATCTGCAGAAGCTGTATGTTATTCAGGCCCAGACAGCATGT
AGCAGGAGATAG

Peptide Sequence

PEP ID

XP_016440999.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase EDR1-like isoform X7 [Nicotiana tabacum]
Sequence

MSVAYAGISTSEALGRNPIELLTDARDYGDADHVVHQVKKGEIWTRQFPAKNKQGDRFVV
VATNTPFYDDDGTFVGVISISSDVRLFQETGVASMGVKQLEADTTFRAVGARTLASSKLG
LDRQQPLQVTIASKISNLASKVSNKVKSKIKTGESSVLRESGSGDSHHSDHTFSDAALPD
HREDANSRGGSTPMGDVHPFPVGIFSSLAKEEHSPGKASSDCGDESEGKQGISTIITSKA
EAWMAKKILSWPWKGNEREASEAKTTRFIWPWLINDQDNELSHSNRYNALKPNNQFIDTN
RTTTYEASGSCSSSFCVNSTSSASSCRSTSSSAFSKVGVDTGRLDYEILWEDLTIREQIG
EGSCGKVYRALWYGSDVAVKVFAKQEYSEEVIYSFKQEVSLMKLLRHPNILLFMGAVTSP
ERLCIVTEFLRRGSLFRLLQRNSSKLEWRRRIHMALDIARGMNYLHHLNPPIVHRDLKSS
NLLVDKNWTVKVGDFGLSRLKHETYLATKTGKGTPQWMAPEVLRSEHSDEKSDIYSFGVI
LWELATGKIPWDNLNPVQVIGAVGFMNQRLDIPKDVHPQWASIIESCWNSEPRSRPSSKK
LVEKLNDLQKLYVIQAQTACSRR

Transcript Sequence

Gene sequence data has not been registered.